To an expert, green coffee is a text. It can be read bean by bean, telling the entire story of the coffee from the tree, through the processing, sorting and screening.
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I am not an expert on defects (you have to work in the industrial/commercial end of the trade to see lots of bad coffee!), but I cup and roast coffee everyday. I prepared this image (below) from coffee samples in my "green coffee files" (several sets of hardware drawers where I keep all green and roasted samples for reference) at the request of my customers. The image is not all-inclusive, and is not composed entirely of defects.
Do not misinterpret the presence of defects in a coffee as the sole indication of its quality. Dry-processed coffees will always have more defects, and an inexperienced viewer can easily interpret the presence of more silverskin (chaff) that gives the coffee a very yellow appearance as a defect.
Ultimately, the quality of a coffee is found in the cup.

Firstly, good green coffee from many origins has a different look based on preparation standards, processing (wet, dry, semi, pulped, etc). The SCAA distributes a poster of the green coffee grades, but it is based upon wet-processed coffee, and is quite useless for judging other processess and odd-looking cultivars.
Furthermore, some of the worst defects are impossible to see, phenolic coffee in particular. Phenol defect is found in many origins, but is most identifiable in Colombia and Brazil (I have encountered it in Mexico, Honduras, and Nicaragua to a greater extent than in El Salvador and Guatemal ... not sure what implications can be drwan from that. No conclusive research has proven the cause of phenol in the cup, but it is one of the most obvious defects to taste. It is a dirty, sulpherous flavor, very potent both in the aromatics and cup flavors. And you cannot see it: the green and roasted seed appear as a wholesome coffee bean.
Some have posited that the cause is on the tree, in particular that it comes from trees with a consistently sunny side and a consistently shaded side. Others say it is from bad processing, that it is microbial. Others say it is the trees defence from the Broca (the coffee berry boring insect). Due to the cup experience, I side with the microbe bacteria explanation. It shares sensorial attributes with volatile sulpher compounds, such as hydrogen sulfide. Whether this occurs on the tree or in the processing is unsure. Phenol defect can be present in some of the best coffees, produced at the finest mills.
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